Changelog

JSON schema for MultiQC config & AI summaries fixes and optimizations.

Feature updates and improvements​

• Studios
  • Private sessions: When adding a new session, the number of concurrent connections can now be defined in General Config > Collaboration.
  • Dynamic Studio templates: Labels have been added to indicate the status of support (e.g., Recommended, Deprecated) for a Studio template version. Users can now also switch the Studio's base template image when starting a session as new.
• Nextflow
  • Update WfManifest class to include the new icon property introduced in Nextflow.
  • Add a new migration file to add the new icon column into all the tables of entities that use the WfManifest class as @Embedded property.
• Audit log update: Pipeline edit events are now logged.
• Added totalProcesses count to workflow progress responses.
• Switch AWS Batch compute environment dependencies to AWS SDK v2.
• New workflow job monitoring collects and publishes Platform metrics.
• Support image upload in the pipeline import and pipeline update forms, to be used as pipeline logos.

Bug fixes​

• Fixed a bug where resource labels were erroneously editable for the maintain role when starting an existing Studio.
• Fixed a potential NullPointerException on code related to Google Batch, where the method is expected to return null.
• Fixed an issue where users were not able to remove the organization logo.

Feature updates and improvements​

• Implement pending queue as stream by @pditommaso in https://github.com/seqeralabs/wave/pull/809

Full changelog: https://github.com/seqeralabs/wave/compare/v1.19.1...v1.19.2

Bug fixes​

• Revert "Add arch in wave metrics (#791)" by @pditommaso in 0fd2eefa

Full changelog: https://github.com/seqeralabs/wave/compare/v1.19.0...v1.19.1

Feature updates and improvements​

• Add link to release by @ewels in https://github.com/seqeralabs/wave/pull/804
• Add submission queue to job manager by @pditommaso in https://github.com/seqeralabs/wave/pull/805
• Add arch in wave metrics by @munishchouhan in https://github.com/seqeralabs/wave/pull/791

Full changelog: https://github.com/seqeralabs/wave/compare/v1.18.4...v1.19.0

Feature updates and improvements​

• Studios
  • Add Studio session lifespan setting. This feature allows you to set a lifespan for a session, after which the session is stopped automatically.
  • Add Studios resource labels support. Workspace admins and owners can edit resource labels inherited from the compute environment and apply them to a Studio session. The edited resource labels associated with each session don’t affect the default resource labels associated with the compute environment.
• Free tier
  • Reduce the maximum number of organization members to 3.
  • Resource tracking in the Platform UI for improved management of free tier limits.
  • User disable/re-enable is now supported.
• Fusion
  • AWS Batch compute environments default to Amazon Linux 2023 AMI when Fusion v2 is enabled
• Implement collapsible view for JSON workflow parameters tab and add View as YAML option.
• Notify the user when secrets cleanup fails.
• Update the pipeline name regular expression to allow pipeline names containing dots ('.').
• Mark long-running jobs with a warning: This warning will be displayed when a workflow has been in the RUNNING state for more than 3 hours and no single task moved from one state to the next.
• Set ECS_CONTAINER_START_TIMEOUT to 10 minutes in the ECS settings used by AWS Batch CEs in order to prevent the error Task failed to start - DockerTimeoutError: Could not transition to started; timed out after waiting 3m0s.
• Upgrade to Angular 18

Bug fixes​

• Studios
  • Fixed an issue with searches for names containing special SQL wildcard characters (_, %).
  • Fixed an issue to ensure that the Maintain role is not able to change resource labels inherited from the selected compute environment when adding/starting a Studio.

Feature updates and improvements​

• Add robots and favicon files by @pditommaso in 40c91f5
• Improve errors and warns logging by @pditommaso in 216b822

Full changelog: https://github.com/seqeralabs/wave/compare/v1.18.3...v1.18.4

Feature updates and improvements​

• Add DenyCrawlerFilter by @pditommaso in https://github.com/seqeralabs/wave/pull/803

Full changelog: https://github.com/seqeralabs/wave/compare/v1.18.2...v1.18.3

Feature updates and improvements​

• Merge docs.seqera.io Wave API into OpenAPI by @munishchouhan in https://github.com/seqeralabs/wave/pull/800
• Change /view/scans to post by @munishchouhan in https://github.com/seqeralabs/wave/pull/802

Full changelog: https://github.com/seqeralabs/wave/compare/v1.18.1...v1.18.2

Feature updates and improvements​

• Add DenyHosts to pairing websocket by @pditommaso in f5369eed
• Use virtual threads for build, scan, and mirror jobs by @pditommaso in https://github.com/seqeralabs/wave/pull/742
• Remove metrics from OpenAPI by @munishchouhan in https://github.com/seqeralabs/wave/pull/798
• Bump ch.qos.logback:logback-classic:1.5.16 by @munishchouhan in https://github.com/seqeralabs/wave/pull/799

Full changelog: https://github.com/seqeralabs/wave/compare/v1.18.0...v1.18.1